近期活动

LLP Seminars

Probing Site-Specific Orientations and Dynamics of Biomolecules via Vibrational Probes

Dr. Bei Ding
Wed, 2016-05-04 10:00 - 11:00
物理楼616

The first half of my talk will be focused on the developing 13C=16O isotope labeled amide unit as a Sum Frequency Generation vibrational probe for antimicrobial peptide ovispirin-1 at various interfaces. We have demonstrated that the linewidth of site-specific SFG vibrational probes are indicative of its microenvironment and signals of different polarization combinations reveal the site-specific orientation information of interfacial peptides. In the second half, we study the denaturant-induced (urea, methylurea, dimethylurea and tetramethylurea) dynamic changes and hydration states of CN probes incorporated into aromatic side chains of peptides using two-dimensional vibrational photon echo spectroscopy and fluorescence spectroscopy. We provide the first experimental evidence that methylated urea molecules crowd more effectively around the hydrophobic side chains compared to urea. Especially, we have shown that, tetramethylurea, the strongest denaturant in the series, preferentially shields and dehydrates the tryptophan like at a pair of “tweezers”, which is not observed for other derivatives in the series.
 

Dr. Bei Ding received her B.S. degree in Chemistry from Peking University in 2009 and her Ph.D. degree in Chemistry from University of Michigan in 2014 (Advisor: Prof. Zhan Chen). She also has a MSE degree in Electrical Engineering (Optics and Photonics) from University of Michigan. Currently she is a postdoctoral researcher at the University of Pennsylvania (Advisor: Prof. Feng Gai).